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Distinguishing novel coronavirus influenza A virus pneumonia with CT radiomics and clinical features

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机构: [1]Hebei Univ, Affiliated Hosp, Dept Radiol, Clin Med Sch, Baoding 071000, Peoples R China [2]Baoding First Cent Hosp, Baoding 071000, Peoples R China [3]United Imaging Intelligence Beijing Co Ltd, Yongteng North Rd, Beijing 100094, Peoples R China [4]Hebei Key Lab Precise Imaging Inflammat Related Tu, Baoding 071000, Peoples R China
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关键词: Novel coronavirus pneumonia (NCP) Influenza A virus (IAV) pulmonary infection Computed tomography (CT) Radiomics Machine learning

摘要:
ObjectivesTo differentiate novel coronavirus pneumonia (NCP) with influenza A virus (IAV) pulmonary infection based on computed tomography (CT) radiomics features combined with clinical feature.MethodsA total of 292 patients were enrolled, as NCP determined with reverse-transcription polymerase chain reaction (RT-PCR) and abnormal chest CT findings and IAV pulmonary infection confirmed by nucleic acid test with pneumonia lesion in the chest CT, retrospectively. The dataset was randomly divided into 233 cases in the training set and 59 cases in the validation set according to the ratio of 8:2, and there were 107 cases collected for verification as external test set. Firstly, voxel-based gray-level discretization (binWidth = 25) and Z-Score normalization were applied to preprocess the patient's ROI and normalize the extracted features. Then, the most predictive radiomic features were selected and their corresponding coefficients were evaluated using the correlation coefficient algorithm and the Least Absolute Shrinkage and Selection Operator (LASSO) algorithm. Subsequently, univariate logistic regression was employed to screen for clinically discriminative features from the patient's clinical characteristics. Finally, constructing the radiomics model and clinical model using support vector machines and logistic regression methods, respectively. And then combining these features of the two to construct a combined model. Receiver operating characteristic curve (ROC), calibration curve, and decision curve were performed to evaluate the classification of the radiomics model, clinical model and combined model. Area under ROC curve (AUC) were calculated to evaluate the diagnostic efficiency, and Delong's test was used to compare the AUC between different models.ResultsAge, white blood cells, neutrophils, lymphocytes, and basic diseases reached statistical significance in the training set. After LASSO, 16 optimal radiomics features were retained. In the validation set and external test set, the SVM radiomics model achieved AUCs of 0.818 and 0.808 for automatic classification of NCP and IAV pulmonary infection,; and the clinical classification model shad AUCs were 0.676 and 0.669; finally, the 5 clinical features and the 16 selected radiomics features were used to construct the combined model with the AUCs of 0.821 and 0.820. After incorporating clinical features, the clinical model's discriminatory and predictive efficacy further improved in testing sets (AUC, 0.669 vs. 0.820, P = 0.002). The combined model performed well for differentiating the NCP and IAV pulmonary infection, and the calibration curves showed good agreement and decision curves indicated relatively satisfactory clinical benefits.ConclusionThe proposed combined model is feasible and effective in differentiating the NCP and IAV pulmonary infection, which may be used as a convenient and efficient auxiliary tool for radiologists to diagnose noninvasively based on the imaging structure of CT.

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大类 | 2 区 计算机科学
小类 | 2 区 计算机:理论方法
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Q1 COMPUTER SCIENCE, THEORY & METHODS

影响因子: 最新[2023版] 最新五年平均 出版当年[2024版] 出版当年五年平均 出版前一年[2023版]

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第一作者机构: [1]Hebei Univ, Affiliated Hosp, Dept Radiol, Clin Med Sch, Baoding 071000, Peoples R China [4]Hebei Key Lab Precise Imaging Inflammat Related Tu, Baoding 071000, Peoples R China
通讯作者:
通讯机构: [1]Hebei Univ, Affiliated Hosp, Dept Radiol, Clin Med Sch, Baoding 071000, Peoples R China [4]Hebei Key Lab Precise Imaging Inflammat Related Tu, Baoding 071000, Peoples R China
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