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Construction and Comparison of ceRNA Regulatory Network for Different Age Female Breast Cancer

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机构: [1]Hebei Univ, Coll Pharmaceut Sci, Inst Life Sci & Green Dev, Key Lab Pharmaceut Qual Control Hebei Prov, Baoding, Peoples R China [2]Hebei Univ, Coll Life Sci, Minist Educ, Key Lab Med Chem & Mol Diag, Baoding, Peoples R China [3]Hebei Univ, Affiliated Hosp, Dept Breast Surg, Baoding, Peoples R China
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关键词: age breast cancer ceRNA network lncRNA miRNA

摘要:
Studies have shown the difference appearing among the prognosis of patients in different age groups. However, the molecular mechanism implicated in this disparity have not been elaborated. In this study, expression profiles of female breast cancer (BRCA) associated mRNAs, lncRNAs and miRNAs were downloaded from the TCGA database. The sample were manually classified into three groups according to their age at initial pathological diagnosis: young (age <= 39 years), elderly (age >= 65 years), and intermediate (age 40-64 years). lncRNA-miRNA-mRNA competitive endogenous RNA (ceRNA) network was respectively constructed for different age BRCA. Then, the biological functions of differentially expressed mRNAs (DEmRNAs) in ceRNA network were further investigated by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis. Finally, survival analysis was used to identify prognostic biomarkers for different age BRCA patients. We identified 13 RNAs, 38 RNAs and 40 RNAs specific to patients aged <= 39 years, aged 40-64 years, and aged >= 65 years, respectively. Furthermore, the unique pathways were mainly enriched in cytokine-cytokine receptor interaction in patients aged 40-64 years, and were mainly enriched in TGF-beta signaling pathway in patients aged >= 65 years. According to the survival analysis, AGAP11, has-mir-301b, and OSR1 were respectively functioned as prognostic biomarkers in young, intermediate, and elderly group. In summary, our study identified the differences in the ceRNA regulatory networks and provides an effective bioinformatics basis for further understanding of the pathogenesis and predicting outcomes for different age BRCA.

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出版当年[2022]版:
大类 | 3 区 生物学
小类 | 3 区 遗传学
最新[2025]版:
大类 | 3 区 生物学
小类 | 3 区 遗传学
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Q1 GENETICS & HEREDITY
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Q2 GENETICS & HEREDITY

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第一作者机构: [1]Hebei Univ, Coll Pharmaceut Sci, Inst Life Sci & Green Dev, Key Lab Pharmaceut Qual Control Hebei Prov, Baoding, Peoples R China
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