机构:[1]Hebei Univ Chinese Med, Fac Integrated Tradit Chinese & Western Med, Shijiazhuang 050091, Hebei, Peoples R China[2]Hebei Univ Chinese Med, Hebei Key Lab Chinese Med Res Cardiocerebrovasc D, Shijiazhuang 050091, Hebei, Peoples R China[3]Hebei Univ, Sch Clin Med, Baoding 071000, Peoples R China[4]Hebei Univ,Dept Neurosurg,Affiliated Hosp,Baoding 071000,Peoples R China医疗神经外科河北大学附属医院重点学科神经外科[5]Hebei Univ Chinese Med, Fac Acupuncture Moxibust & Tuina, Shijiazhuang 050200, Hebei, Peoples R China[6]Hebei Med Univ, Dept Neurosurg, Second Hosp, Shijiazhuang 050000, Hebei, Peoples R China[7]Cangzhou Cent Hosp, Dept Gen Surg, Endoscope Room, Cangzhou 061001, Peoples R China[8]Hebei Univ,Dept Breast Surg,Affiliated Hosp,Baoding 071000,Peoples R China医疗乳腺外科河北大学附属医院[9]Hebei Med Univ, Dept Biochem & Mol Biol, Key Lab Med Biotechnol Hebei Prov, Shijiazhuang 050017, Hebei, Peoples R China
Circular RNAs (circRNAs) have a critical regulatory function in human glioma. However, novel circRNAs related to different pathological grades of glioma and their crucial potential function are worth screening and prediction. CircRNA expression profiling was performed for 6 paired high- and low-grade glioma tissues and 5 adjacent normal brain tissues through next-generation sequencing. Quantitative real-time PCR (qRT-PCR) was conducted to validate circRNA expression. Bioinformatics analysis was performed, and circRNA-miRNA-mRNA networks were constructed. The expression and survival data of miRNAs and target genes were examined by GEPIA, Chinese Glioma Genome Atlas (CGGA), ONCOMINE, and cBioPortal databases. The RNA binding proteins (RBPs), open reading frames (ORFs) and N-6-methyladenosine (m(6)A) modifications of the identified circRNAs were also predicted. Through multilevel research screening, 4 circRNAs (hsa_circ_0000915, hsa_circ_0127664, hsa_circ_0008362, and hsa_circ_0001467) were associated with glioma of different pathological grades and could be preferred candidates for subsequent functional analysis. Therefore, circRNAs are associated with the different pathological grades of glioma and reveal their potential critical regulatory function. CircRNAs might provide vital molecular biomarkers and potential therapeutic targets for glioma.
基金:
National Natural Science Foundation of China [81670273]; Natural Science Foundation of Hebei province [H2020201050]; Provincial Clinical Medicine Talent Programs [3010601198073]; Science and Technology Capacity Improvement Projects of Hebei University of Chinese Medicine [KTZ2019019]; Outstanding Student Scientific Research Ability Improvement Projects of Hebei University of Chinese Medicine [YXZ2019002]; Graduate Innovative Ability Training Projects of Hebei Province [XCXZZBS2020002, hbu2020bs003]
第一作者机构:[1]Hebei Univ Chinese Med, Fac Integrated Tradit Chinese & Western Med, Shijiazhuang 050091, Hebei, Peoples R China[2]Hebei Univ Chinese Med, Hebei Key Lab Chinese Med Res Cardiocerebrovasc D, Shijiazhuang 050091, Hebei, Peoples R China
通讯作者:
通讯机构:[1]Hebei Univ Chinese Med, Fac Integrated Tradit Chinese & Western Med, Shijiazhuang 050091, Hebei, Peoples R China[2]Hebei Univ Chinese Med, Hebei Key Lab Chinese Med Res Cardiocerebrovasc D, Shijiazhuang 050091, Hebei, Peoples R China[3]Hebei Univ, Sch Clin Med, Baoding 071000, Peoples R China
推荐引用方式(GB/T 7714):
Geng Xiuchao,Zhang Yuhao,Li Qiang,et al.Screening and functional prediction of differentially expressed circular RNAs in human glioma of different grades[J].AGING-US.2021,13(2):1989-2014.
APA:
Geng, Xiuchao,Zhang, Yuhao,Li, Qiang,Xi, Wang,Yu, Wentao...&Wang, Hong.(2021).Screening and functional prediction of differentially expressed circular RNAs in human glioma of different grades.AGING-US,13,(2)
MLA:
Geng, Xiuchao,et al."Screening and functional prediction of differentially expressed circular RNAs in human glioma of different grades".AGING-US 13..2(2021):1989-2014